Class: Recombinant part identification (RecombinantPartIdentification)
Identification of a recombinant part.
URI: EVORAO:RecombinantPartIdentification
classDiagram
class RecombinantPartIdentification
click RecombinantPartIdentification href "../RecombinantPartIdentification"
Resource <|-- RecombinantPartIdentification
click Resource href "../Resource"
RecombinantPartIdentification : dateIssued
RecombinantPartIdentification : dateModified
RecombinantPartIdentification : identifier
RecombinantPartIdentification : iri
RecombinantPartIdentification : keyword
RecombinantPartIdentification : partIdentification
RecombinantPartIdentification : publisher
RecombinantPartIdentification --> "0..1" PersonOrOrganization : publisher
click PersonOrOrganization href "../PersonOrOrganization"
RecombinantPartIdentification : sequence
RecombinantPartIdentification --> "* _recommended_" Sequence : sequence
click Sequence href "../Sequence"
Inheritance
Slots
Usages
Schema Source
- from schema: https://w3id.org/evorao/
Mappings
| Mapping Type |
Mapped Value |
| self |
EVORAO:RecombinantPartIdentification |
| native |
EVORAO:RecombinantPartIdentification |
LinkML Source
Direct
```yaml
name: RecombinantPartIdentification
description: Identification of a recombinant part.
title: Recombinant part identification
from_schema: https://w3id.org/evorao/
is_a: Resource
slots:
- partIdentification
- sequence
slot_usage:
partIdentification:
name: partIdentification
description: A short designation of this recombinant part of the related biological
material.
title: Part identification
domain_of:
- RecombinantPartIdentification
range: string
required: true
multivalued: false
sequence:
name: sequence
description: The related sequence information from a sequence provider or in fasta
format.
title: sequence
comments:
- Sequence information is logically one of the minimal quality requirements for
entities such as pathogens, nucleic acids, and proteins, and should always be
provided. However, in some rare cases, a nucleic acid may still be valuable
even if it has not been sequenced after being extracted from identified material.
In such exceptional cases, the sequence may legitimately be missing.
close_mappings:
- geno:0000239
- bao:0002817
related_mappings:
- uniprotrdfs:sequence
domain_of:
- RecombinantPartIdentification
- Protein
- NucleicAcid
- Pathogen
range: Sequence
required: false
recommended: true
multivalued: true
```
Induced
```yaml
name: RecombinantPartIdentification
description: Identification of a recombinant part.
title: Recombinant part identification
from_schema: https://w3id.org/evorao/
is_a: Resource
slot_usage:
partIdentification:
name: partIdentification
description: A short designation of this recombinant part of the related biological
material.
title: Part identification
domain_of:
- RecombinantPartIdentification
range: string
required: true
multivalued: false
sequence:
name: sequence
description: The related sequence information from a sequence provider or in fasta
format.
title: sequence
comments:
- Sequence information is logically one of the minimal quality requirements for
entities such as pathogens, nucleic acids, and proteins, and should always be
provided. However, in some rare cases, a nucleic acid may still be valuable
even if it has not been sequenced after being extracted from identified material.
In such exceptional cases, the sequence may legitimately be missing.
close_mappings:
- geno:0000239
- bao:0002817
related_mappings:
- uniprotrdfs:sequence
domain_of:
- RecombinantPartIdentification
- Protein
- NucleicAcid
- Pathogen
range: Sequence
required: false
recommended: true
multivalued: true
attributes:
partIdentification:
name: partIdentification
description: A short designation of this recombinant part of the related biological
material.
title: Part identification
from_schema: https://w3id.org/evorao/
rank: 1000
alias: partIdentification
owner: RecombinantPartIdentification
domain_of:
- RecombinantPartIdentification
range: string
required: true
multivalued: false
sequence:
name: sequence
description: The related sequence information from a sequence provider or in fasta
format.
title: sequence
comments:
- Sequence information is logically one of the minimal quality requirements for
entities such as pathogens, nucleic acids, and proteins, and should always be
provided. However, in some rare cases, a nucleic acid may still be valuable
even if it has not been sequenced after being extracted from identified material.
In such exceptional cases, the sequence may legitimately be missing.
from_schema: https://w3id.org/evorao/
close_mappings:
- geno:0000239
- bao:0002817
related_mappings:
- uniprotrdfs:sequence
rank: 1000
alias: sequence
owner: RecombinantPartIdentification
domain_of:
- RecombinantPartIdentification
- Protein
- NucleicAcid
- Pathogen
range: Sequence
required: false
recommended: true
multivalued: true
keyword:
name: keyword
description: A keyword or tag describing the resource.
title: keyword
from_schema: https://w3id.org/evorao/
rank: 1000
slot_uri: dcat:keyword
alias: keyword
owner: RecombinantPartIdentification
domain_of:
- Resource
range: string
required: false
multivalued: true
dateIssued:
name: dateIssued
description: Date of formal issuance (e.g., publication) of the resource.
title: date issued
comments:
- encoded using the relevant ISO 8601 Date and Time compliant string [DATETIME].
from_schema: https://w3id.org/evorao/
exact_mappings:
- sepio:0000051
close_mappings:
- schema:datePublished
- schema:dateCreated
rank: 1000
slot_uri: dct:issued
alias: dateIssued
owner: RecombinantPartIdentification
domain_of:
- Resource
range: datetime
required: false
multivalued: false
dateModified:
name: dateModified
description: Most recent date on which the resource was changed, updated or modified.
title: date modified
comments:
- encoded using the relevant ISO 8601 Date and Time compliant string [DATETIME].
from_schema: https://w3id.org/evorao/
exact_mappings:
- sepio:0000036
close_mappings:
- schema:dateModified
rank: 1000
slot_uri: dct:modified
alias: dateModified
owner: RecombinantPartIdentification
domain_of:
- Resource
range: datetime
required: false
multivalued: false
identifier:
name: identifier
description: A unique identifier of the resource being described or cataloged.
title: identifier
comments:
- The identifier is a text string which is assigned to the resource to provide
an unambiguous reference within a particular context. Persistent identifiers
should be provided as HTTP URIs.
from_schema: https://w3id.org/evorao/
exact_mappings:
- schema:identifier
rank: 1000
slot_uri: dct:identifier
alias: identifier
owner: RecombinantPartIdentification
domain_of:
- Resource
range: string
required: false
multivalued: true
iri:
name: iri
description: International Resource Identifier (IRI) that uniquely identifies
or refers to the resource. IRIs include URIs, and URIs include URLs.
title: IRI
comments:
- An IRI is a global identifier standardized by IETF RFC 3987. It may or may not
be resolvable on the web. IRIs include URIs, and URIs include URLs.
from_schema: https://w3id.org/evorao/
close_mappings:
- biolink:iri
related_mappings:
- mi:url
narrow_mappings:
- schema:url
rank: 1000
is_a: identifier
alias: iri
owner: RecombinantPartIdentification
domain_of:
- Resource
range: uri
required: false
multivalued: true
publisher:
name: publisher
description: The entity responsible for making the resource available.
title: publisher
comments:
- Resources of type foaf:Agent like EVORAO:PersonOrOrganization are recommended
as values for this property.
from_schema: https://w3id.org/evorao/
rank: 1000
slot_uri: dct:publisher
alias: publisher
owner: RecombinantPartIdentification
domain_of:
- Resource
range: PersonOrOrganization
required: false
multivalued: false
```