EVORAO

Class: Natural part origin (NaturalPartOrigin)

Information on the origin of a natural part that composes the biological material.

 classDiagram
    class NaturalPartOrigin
    click NaturalPartOrigin href "../NaturalPartOrigin"
      BiologicalPartOrigin <|-- NaturalPartOrigin
        click BiologicalPartOrigin href "../BiologicalPartOrigin"
      
      NaturalPartOrigin : accessToPhysicalGeneticResource
        
      NaturalPartOrigin : collectedBeforeDate
        
      NaturalPartOrigin : collectionDate
        
      NaturalPartOrigin : countryOfCollection
        
          
    
    
    NaturalPartOrigin --> "1" Country : countryOfCollection
    click Country href "../Country"

        
      NaturalPartOrigin : dateIssued
        
      NaturalPartOrigin : dateModified
        
      NaturalPartOrigin : identifier
        
      NaturalPartOrigin : indigenousPeopleAndLocalCommunityOrigin
        
          
    
    
    NaturalPartOrigin --> "0..1" IplcOrigin : indigenousPeopleAndLocalCommunityOrigin
    click IplcOrigin href "../IplcOrigin"

        
      NaturalPartOrigin : iri
        
      NaturalPartOrigin : keyword
        
      NaturalPartOrigin : permitIdentifierForAbs
        
      NaturalPartOrigin : publisher
        
          
    
    
    NaturalPartOrigin --> "0..1" PersonOrOrganization : publisher
    click PersonOrOrganization href "../PersonOrOrganization"

        
      NaturalPartOrigin : recombinantPartIdentification
        
          
    
    
    NaturalPartOrigin --> "0..1" RecombinantPartIdentification : recombinantPartIdentification
    click RecombinantPartIdentification href "../RecombinantPartIdentification"

Inheritance

Resource
- BiologicalPartOrigin
  - NaturalPartOrigin

Slots

Name	Cardinality and Range	Description	Inheritance
countryOfCollection	1 Country	The geographical location where the sample was collected in situ	direct
indigenousPeopleAndLocalCommunityOrigin	0..1 IplcOrigin	The specific IPLC area (Indigenous People and Local Communities) from which t…	direct
collectionDate	1 Datetime	The date when the sample was collected in situ	direct
collectedBeforeDate	0..1 recommended Boolean	Set to TRUE if a proxy date for the collection date is used	direct
permitIdentifierForAbs	0..1 String	Reference of the permit identifiers for access to the genetic resource, appli…	direct
recombinantPartIdentification	0..1 RecombinantPartIdentification	Identification of a recombinant part	BiologicalPartOrigin
accessToPhysicalGeneticResource	0..1 recommended Boolean	Indicate if the biological part was produced with access to a physical geneti…	BiologicalPartOrigin
keyword	* String	A keyword or tag describing the resource	Resource
dateIssued	0..1 Datetime	Date of formal issuance (e	Resource
dateModified	0..1 Datetime	Most recent date on which the resource was changed, updated or modified	Resource
identifier	* String	A unique identifier of the resource being described or cataloged	Resource
iri	* Uri	International Resource Identifier (IRI) that uniquely identifies or refers to…	Resource
publisher	0..1 PersonOrOrganization	The entity responsible for making the resource available	Resource

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/evorao/

Mappings

Mapping Type	Mapped Value
self	EVORAO:NaturalPartOrigin
native	EVORAO:NaturalPartOrigin
broad	sepio:0000058, sepio:0000058
related	ncit:C87913, ncit:C43581, ncit:C87913, ncit:C43581

LinkML Source

Direct

Induced

```yaml name: NaturalPartOrigin description: Information on the origin of a natural part that composes the biological material. title: Natural part origin from_schema: https://w3id.org/evorao/ related_mappings: - ncit:C87913 - ncit:C43581 - ncit:C87913 - ncit:C43581 broad_mappings: - sepio:0000058 - sepio:0000058 is_a: BiologicalPartOrigin slot_usage: countryOfCollection: name: countryOfCollection description: The geographical location where the sample was collected in situ. Used for Nagoya/CBD; equivalent to 'country of origin'. title: country of collection close_mappings: - wdp:P495 - hso:0000360 - schema:countryOfOrigin related_mappings: - dwc:country - genepio:0000118 broad_mappings: - dct:spatial domain_of: - NaturalPartOrigin range: Country required: true multivalued: false indigenousPeopleAndLocalCommunityOrigin: name: indigenousPeopleAndLocalCommunityOrigin description: The specific IPLC area (Indigenous People and Local Communities) from which this sample/element was sampled, if relevant. title: indigenous people and local community origin related_mappings: - mesh:D000081034 - ncit:C41152 domain_of: - NaturalPartOrigin range: IplcOrigin required: false multivalued: false collectionDate: name: collectionDate description: The date when the sample was collected in situ. If unknown/private, use a proxy date such as 'date received' and indicate this by setting to true the before date property. title: collection date related_mappings: - obib:0000714 broad_mappings: - dct:date domain_of: - NaturalPartOrigin range: datetime required: true multivalued: false collectedBeforeDate: name: collectedBeforeDate description: Set to TRUE if a proxy date for the collection date is used. title: collected before date related_mappings: - sepio:0000105 - ro:0002089 ifabsent: 'false' domain_of: - NaturalPartOrigin range: boolean required: false recommended: true multivalued: false permitIdentifierForAbs: name: permitIdentifierForAbs description: Reference of the permit identifiers for access to the genetic resource, applicable if the genetic resource falls under Access and Benefit-Sharing (ABS) regulations. title: permit identifier for ABS domain_of: - NaturalPartOrigin required: false multivalued: false attributes: countryOfCollection: name: countryOfCollection description: The geographical location where the sample was collected in situ. Used for Nagoya/CBD; equivalent to 'country of origin'. title: country of collection from_schema: https://w3id.org/evorao/ close_mappings: - wdp:P495 - hso:0000360 - schema:countryOfOrigin related_mappings: - dwc:country - genepio:0000118 broad_mappings: - dct:spatial rank: 1000 alias: countryOfCollection owner: NaturalPartOrigin domain_of: - NaturalPartOrigin range: Country required: true multivalued: false indigenousPeopleAndLocalCommunityOrigin: name: indigenousPeopleAndLocalCommunityOrigin description: The specific IPLC area (Indigenous People and Local Communities) from which this sample/element was sampled, if relevant. title: indigenous people and local community origin from_schema: https://w3id.org/evorao/ related_mappings: - mesh:D000081034 - ncit:C41152 rank: 1000 alias: indigenousPeopleAndLocalCommunityOrigin owner: NaturalPartOrigin domain_of: - NaturalPartOrigin range: IplcOrigin required: false multivalued: false collectionDate: name: collectionDate description: The date when the sample was collected in situ. If unknown/private, use a proxy date such as 'date received' and indicate this by setting to true the before date property. title: collection date from_schema: https://w3id.org/evorao/ related_mappings: - obib:0000714 broad_mappings: - dct:date rank: 1000 alias: collectionDate owner: NaturalPartOrigin domain_of: - NaturalPartOrigin range: datetime required: true multivalued: false collectedBeforeDate: name: collectedBeforeDate description: Set to TRUE if a proxy date for the collection date is used. title: collected before date from_schema: https://w3id.org/evorao/ related_mappings: - sepio:0000105 - ro:0002089 rank: 1000 ifabsent: 'false' alias: collectedBeforeDate owner: NaturalPartOrigin domain_of: - NaturalPartOrigin range: boolean required: false recommended: true multivalued: false permitIdentifierForAbs: name: permitIdentifierForAbs description: Reference of the permit identifiers for access to the genetic resource, applicable if the genetic resource falls under Access and Benefit-Sharing (ABS) regulations. title: permit identifier for ABS from_schema: https://w3id.org/evorao/ rank: 1000 alias: permitIdentifierForAbs owner: NaturalPartOrigin domain_of: - NaturalPartOrigin range: string required: false multivalued: false recombinantPartIdentification: name: recombinantPartIdentification description: Identification of a recombinant part. title: recombinant part identification comments: - Information not required if the current biological part constitutes the complete biological material. from_schema: https://w3id.org/evorao/ rank: 1000 alias: recombinantPartIdentification owner: NaturalPartOrigin domain_of: - BiologicalPartOrigin range: RecombinantPartIdentification required: false multivalued: false accessToPhysicalGeneticResource: name: accessToPhysicalGeneticResource description: Indicate if the biological part was produced with access to a physical genetic resource. title: access to physical genetic resource from_schema: https://w3id.org/evorao/ rank: 1000 alias: accessToPhysicalGeneticResource owner: NaturalPartOrigin domain_of: - BiologicalPartOrigin range: boolean required: false recommended: true multivalued: false keyword: name: keyword description: A keyword or tag describing the resource. title: keyword from_schema: https://w3id.org/evorao/ rank: 1000 slot_uri: dcat:keyword alias: keyword owner: NaturalPartOrigin domain_of: - Resource range: string required: false multivalued: true dateIssued: name: dateIssued description: Date of formal issuance (e.g., publication) of the resource. title: date issued comments: - encoded using the relevant ISO 8601 Date and Time compliant string [DATETIME]. from_schema: https://w3id.org/evorao/ exact_mappings: - sepio:0000051 close_mappings: - schema:datePublished - schema:dateCreated rank: 1000 slot_uri: dct:issued alias: dateIssued owner: NaturalPartOrigin domain_of: - Resource range: datetime required: false multivalued: false dateModified: name: dateModified description: Most recent date on which the resource was changed, updated or modified. title: date modified comments: - encoded using the relevant ISO 8601 Date and Time compliant string [DATETIME]. from_schema: https://w3id.org/evorao/ exact_mappings: - sepio:0000036 close_mappings: - schema:dateModified rank: 1000 slot_uri: dct:modified alias: dateModified owner: NaturalPartOrigin domain_of: - Resource range: datetime required: false multivalued: false identifier: name: identifier description: A unique identifier of the resource being described or cataloged. title: identifier comments: - The identifier is a text string which is assigned to the resource to provide an unambiguous reference within a particular context. Persistent identifiers should be provided as HTTP URIs. from_schema: https://w3id.org/evorao/ exact_mappings: - schema:identifier rank: 1000 slot_uri: dct:identifier alias: identifier owner: NaturalPartOrigin domain_of: - Resource range: string required: false multivalued: true iri: name: iri description: International Resource Identifier (IRI) that uniquely identifies or refers to the resource. IRIs include URIs, and URIs include URLs. title: IRI comments: - An IRI is a global identifier standardized by IETF RFC 3987. It may or may not be resolvable on the web. IRIs include URIs, and URIs include URLs. from_schema: https://w3id.org/evorao/ close_mappings: - biolink:iri related_mappings: - mi:url narrow_mappings: - schema:url rank: 1000 is_a: identifier alias: iri owner: NaturalPartOrigin domain_of: - Resource range: uri required: false multivalued: true publisher: name: publisher description: The entity responsible for making the resource available. title: publisher comments: - Resources of type foaf:Agent like EVORAO:PersonOrOrganization are recommended as values for this property. from_schema: https://w3id.org/evorao/ rank: 1000 slot_uri: dct:publisher alias: publisher owner: NaturalPartOrigin domain_of: - Resource range: PersonOrOrganization required: false multivalued: false ```

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