EVORAO

Class: Vocabulary (Vocabulary)

A subset of words or phrases specific to a particular subject or field.

URI: EVORAO:Vocabulary

 classDiagram
    class Vocabulary
    click Vocabulary href "../Vocabulary"
      Catalogue <|-- Vocabulary
        click Catalogue href "../Catalogue"
      
      Vocabulary : dateIssued
        
      Vocabulary : dateModified
        
      Vocabulary : description
        
      Vocabulary : identifier
        
      Vocabulary : iri
        
      Vocabulary : keyword
        
      Vocabulary : publisher
        
          
    
    
    Vocabulary --> "0..1" PersonOrOrganization : publisher
    click PersonOrOrganization href "../PersonOrOrganization"

        
      Vocabulary : term
        
          
    
    
    Vocabulary --> "* _recommended_" Term : term
    click Term href "../Term"

        
      Vocabulary : termDataProvider
        
          
    
    
    Vocabulary --> "0..1" DataProvider : termDataProvider
    click DataProvider href "../DataProvider"

        
      Vocabulary : title
        
      Vocabulary : version
        
      

Inheritance

Slots

Name Cardinality and Range Description Inheritance
termDataProvider 0..1
DataProvider
An external API or Endpoint that permits to retrieve the terms of this vocabu… direct
term * recommended
Term
The terms related to this vocabulary direct
title 1
String
A name given to the resource Dataset
description 1 recommended
String
A short explanation of the characteristics, features, or nature of the curren… Dataset
version 0..1 recommended
String
The version indicator (name or identifier) of a resource Dataset
keyword *
String
A keyword or tag describing the resource Resource
dateIssued 0..1
Datetime
Date of formal issuance (e Resource
dateModified 0..1
Datetime
Most recent date on which the resource was changed, updated or modified Resource
identifier *
String
A unique identifier of the resource being described or cataloged Resource
iri *
Uri
International Resource Identifier (IRI) that uniquely identifies or refers to… Resource
publisher 0..1
PersonOrOrganization
The entity responsible for making the resource available Resource

Usages

used by used in type used
Term inVocabulary range Vocabulary
CommonName inVocabulary range Vocabulary
VirusName inVocabulary range Vocabulary
AlternateName inVocabulary range Vocabulary
RiskGroup inVocabulary range Vocabulary
BiosafetyLevel inVocabulary range Vocabulary
Doi inVocabulary range Vocabulary
Journal inVocabulary range Vocabulary
PdbReference inVocabulary range Vocabulary
Keyword inVocabulary range Vocabulary
TagSequence inVocabulary range Vocabulary
SpecialFeature inVocabulary range Vocabulary
ExpressionVector inVocabulary range Vocabulary
PlasmidSelection inVocabulary range Vocabulary
PropagationHost inVocabulary range Vocabulary
TransmissionMethod inVocabulary range Vocabulary
ProductionCellLine inVocabulary range Vocabulary
ProductCategory inVocabulary range Vocabulary
IsolationHost inVocabulary range Vocabulary
GeographicalOrigin inVocabulary range Vocabulary
IplcOrigin inVocabulary range Vocabulary
Country inVocabulary range Vocabulary
IataClassification inVocabulary range Vocabulary
Variant inVocabulary range Vocabulary
TaxonomicRank inVocabulary range Vocabulary
Taxon inVocabulary range Vocabulary
ClinicalGroup inVocabulary range Vocabulary

Identifier and Mapping Information

Schema Source

Mappings

Mapping Type Mapped Value
self EVORAO:Vocabulary
native EVORAO:Vocabulary
exact sio:001080, sio:001080
broad skos:Collection, skos:Collection
related t4fs:0000335, wd:Q6499736, t4fs:0000335, wd:Q6499736
close wd:Q1391494, wd:Q6537693, wd:Q8380731, wd:Q1391494, wd:Q6537693, wd:Q8380731

LinkML Source

Direct

```yaml name: Vocabulary description: A subset of words or phrases specific to a particular subject or field. title: Vocabulary from_schema: https://w3id.org/evorao/ exact_mappings: - sio:001080 - sio:001080 close_mappings: - wd:Q1391494 - wd:Q6537693 - wd:Q8380731 - wd:Q1391494 - wd:Q6537693 - wd:Q8380731 related_mappings: - t4fs:0000335 - wd:Q6499736 - t4fs:0000335 - wd:Q6499736 broad_mappings: - skos:Collection - skos:Collection is_a: Catalogue slots: - termDataProvider - term slot_usage: termDataProvider: name: termDataProvider description: An external API or Endpoint that permits to retrieve the terms of this vocabulary. title: term data provider domain_of: - Vocabulary range: DataProvider required: false multivalued: false term: name: term description: The terms related to this vocabulary. title: term related_mappings: - dct:hasPart domain_of: - Vocabulary range: Term required: false recommended: true multivalued: true ```

Induced

```yaml name: Vocabulary description: A subset of words or phrases specific to a particular subject or field. title: Vocabulary from_schema: https://w3id.org/evorao/ exact_mappings: - sio:001080 - sio:001080 close_mappings: - wd:Q1391494 - wd:Q6537693 - wd:Q8380731 - wd:Q1391494 - wd:Q6537693 - wd:Q8380731 related_mappings: - t4fs:0000335 - wd:Q6499736 - t4fs:0000335 - wd:Q6499736 broad_mappings: - skos:Collection - skos:Collection is_a: Catalogue slot_usage: termDataProvider: name: termDataProvider description: An external API or Endpoint that permits to retrieve the terms of this vocabulary. title: term data provider domain_of: - Vocabulary range: DataProvider required: false multivalued: false term: name: term description: The terms related to this vocabulary. title: term related_mappings: - dct:hasPart domain_of: - Vocabulary range: Term required: false recommended: true multivalued: true attributes: termDataProvider: name: termDataProvider description: An external API or Endpoint that permits to retrieve the terms of this vocabulary. title: term data provider from_schema: https://w3id.org/evorao/ rank: 1000 alias: termDataProvider owner: Vocabulary domain_of: - Vocabulary range: DataProvider required: false multivalued: false term: name: term description: The terms related to this vocabulary. title: term from_schema: https://w3id.org/evorao/ related_mappings: - dct:hasPart rank: 1000 alias: term owner: Vocabulary domain_of: - Vocabulary range: Term required: false recommended: true multivalued: true title: name: title description: A name given to the resource. title: title comments: - The title of the item should be as short and descriptive as possible. - 'E.g. for virus products it should basically be based on the following Pattern: ''Virus name'', ''virus host type'', ''collection year'', ''country of collection'' ex ''suspected epidemiological origin'', ''genotype'', ''strain'', ''variant name or specific feature.' from_schema: https://w3id.org/evorao/ exact_mappings: - schema:name - rdfs:label rank: 1000 slot_uri: dct:title alias: title owner: Vocabulary domain_of: - Dataset - DataService - Publication - Term - License - Certification - FundingSource range: string required: true multivalued: false description: name: description description: A short explanation of the characteristics, features, or nature of the current item. title: description comments: - Describe this item in few lines. This description will serve as a summary to present the resource. from_schema: https://w3id.org/evorao/ exact_mappings: - schema:description rank: 1000 slot_uri: dct:description alias: description owner: Vocabulary domain_of: - Dataset - DataService - Term - PersonOrOrganization - File - ContactPoint - License - Certification - FundingSource range: string required: true recommended: true multivalued: false version: name: version description: The version indicator (name or identifier) of a resource. title: version from_schema: https://w3id.org/evorao/ exact_mappings: - pav:version close_mappings: - wdp:P393 - schema:version related_mappings: - schema:identifier rank: 1000 slot_uri: dcat:version alias: version owner: Vocabulary domain_of: - Dataset - Version - Taxonomy range: string required: false recommended: true multivalued: false keyword: name: keyword description: A keyword or tag describing the resource. title: keyword from_schema: https://w3id.org/evorao/ rank: 1000 slot_uri: dcat:keyword alias: keyword owner: Vocabulary domain_of: - Resource range: string required: false multivalued: true dateIssued: name: dateIssued description: Date of formal issuance (e.g., publication) of the resource. title: date issued comments: - encoded using the relevant ISO 8601 Date and Time compliant string [DATETIME]. from_schema: https://w3id.org/evorao/ exact_mappings: - sepio:0000051 close_mappings: - schema:datePublished - schema:dateCreated rank: 1000 slot_uri: dct:issued alias: dateIssued owner: Vocabulary domain_of: - Resource range: datetime required: false multivalued: false dateModified: name: dateModified description: Most recent date on which the resource was changed, updated or modified. title: date modified comments: - encoded using the relevant ISO 8601 Date and Time compliant string [DATETIME]. from_schema: https://w3id.org/evorao/ exact_mappings: - sepio:0000036 close_mappings: - schema:dateModified rank: 1000 slot_uri: dct:modified alias: dateModified owner: Vocabulary domain_of: - Resource range: datetime required: false multivalued: false identifier: name: identifier description: A unique identifier of the resource being described or cataloged. title: identifier comments: - The identifier is a text string which is assigned to the resource to provide an unambiguous reference within a particular context. Persistent identifiers should be provided as HTTP URIs. from_schema: https://w3id.org/evorao/ exact_mappings: - schema:identifier rank: 1000 slot_uri: dct:identifier alias: identifier owner: Vocabulary domain_of: - Resource range: string required: false multivalued: true iri: name: iri description: International Resource Identifier (IRI) that uniquely identifies or refers to the resource. IRIs include URIs, and URIs include URLs. title: IRI comments: - An IRI is a global identifier standardized by IETF RFC 3987. It may or may not be resolvable on the web. IRIs include URIs, and URIs include URLs. from_schema: https://w3id.org/evorao/ close_mappings: - biolink:iri related_mappings: - mi:url narrow_mappings: - schema:url rank: 1000 is_a: identifier alias: iri owner: Vocabulary domain_of: - Resource range: uri required: false multivalued: true publisher: name: publisher description: The entity responsible for making the resource available. title: publisher comments: - Resources of type foaf:Agent like EVORAO:PersonOrOrganization are recommended as values for this property. from_schema: https://w3id.org/evorao/ rank: 1000 slot_uri: dct:publisher alias: publisher owner: Vocabulary domain_of: - Resource range: PersonOrOrganization required: false multivalued: false ```