Slot: sequence FASTA (sequenceFasta)
Textual encoding of a biological sequence information in FASTA format.
URI: EVORAO:sequenceFasta
Alias: sequenceFasta
Applicable Classes
| Name |
Description |
Modifies Slot |
| Sequence |
A nucleic acid or protein sequence information |
yes |
Properties
- In cases where no reference sequence exists in public repositories, the corresponding FASTA sequence is expected; otherwise, the reference sequence is sufficient. In case the sequence is made of multiple parts several fasta sequences can be provided.
- In FASTA format the line before the nucleotide sequence, called the FASTA definition line, must begin with a charater (‘>’), followed by a unique SeqID (sequence identifier).
Schema Source
- from schema: https://w3id.org/evorao/
Mappings
| Mapping Type |
Mapped Value |
| self |
EVORAO:sequenceFasta |
| native |
EVORAO:sequenceFasta |
LinkML Source
```yaml
name: sequenceFasta
description: Textual encoding of a biological sequence information in FASTA format.
title: sequence FASTA
comments:
- In cases where no reference sequence exists in public repositories, the corresponding
FASTA sequence is expected; otherwise, the reference sequence is sufficient. In
case the sequence is made of multiple parts several fasta sequences can be provided.
- In FASTA format the line before the nucleotide sequence, called the FASTA definition
line, must begin with a charater ('>'), followed by a unique SeqID (sequence identifier).
from_schema: https://w3id.org/evorao/
rank: 1000
alias: sequenceFasta
domain_of:
- Sequence
range: string
required: false
multivalued: false
```